Srinivas Aluru
Professor, School of Computational Science and Engineering
Georgia Institute of Technology
1336 Klaus Advanced Computing Building
266 Ferst Drive, Atlanta, GA 30332
Ph: 404-385-1486 / Fax: 404-385-2028
Email: aluru at cc dot gatech dot edu

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Publications

1. A. Varma, A. Ranade and S. Aluru, ``An improved maximum likelihood formulation for accurate genome assembly,'' Proc. 1st IEEE International Conference on Computational Advances in Bio and medical Sciences (ICCABS), pp. 165-170, 2011.
2. B. Jackson, M. Regennitter, X. Yang, P.S. Schnable and S. Aluru,"Parallel de novo assembly of large genomes from high-throughput short reads," 24th International Parallel and Distributed Processing Symposium (IPDPS), 15 pages, 2010.
3. P.S. Schnable, D. Ware, ... , S. Aluru, R.A. Martienssen, S.W. Clifton, W.R. McCombie, R.A. Wing and R.K. Wilson, "The B73 maize genome: complexity, diversity and dynamics," Science, Vol. 326, Issue 5956, pp. 1112-1115, 2009.
4. F. Wei, J.C. Stein, ... , J. Bennetzen, R. Martienssen, W.R. McCombie, S. Aluru, S.W. Clifton, P.S. Schanble, D. Ware, R.K. Wilson and R.A. Wing, "Detailed analysis of a contiguous 22-Mb region of the maize genome," PLOS Genetics, Vol. 5, No. 11, 16 pages, 2009.
5. B.G. Jackson, P.S. Schnable and S. Aluru, "Parallel short sequence assembly of transcriptomes," BMC Bioinformatics, Vol. 10, Suppl. 1:S14, 2009.
6. B.G. Jackson, P.S. Schanble and S. Aluru, "Assembly of large genomes from paired short reads," 1st ISCA International Conference on Bioinformatics and Computational Biology (BiCOB), Springer-Verlag Lecture Notes in Bioinformatics, Vol. 5462, pp. 30-43, 2009.
7. B.G. Jackson, P.S. Schnable and S. Aluru,"Parallel short sequence assembly of transcriptomes," Proc. 7th Asia Pacic Bioinformatics Conference (APBC), pp. 141-152, 2009.
8. B.G. Jackson and S. Aluru, "Parallel construction of bidirected string graphs for genome assembly," Proc. 37th International Conference on Parallel Processing (ICPP), pp. 346-353, 2008.