Srinivas Aluru
Professor, School of Computational Science and Engineering
Georgia Institute of Technology
1336 Klaus Advanced Computing Building
266 Ferst Drive, Atlanta, GA 30332
Ph: 404-385-1486 / Fax: 404-385-2028
Email: aluru at cc dot gatech dot edu

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Publications

1. O. Nikolova, J. Zola and S. Aluru, ``Parallel globally optimal structure learning of Bayesian networks,'' Journal of Parallel and Distributed Computing, Vol. 73, pp. 1039-1048, 2013.
2. M. Aluru, J. Zola, D. Nettleton and S. Aluru, ``Reverse engineering and analysis of large genome-scale gene networks,'' Nucleic Acids Research, Vol. 41, No. 1, pp. e24 (13 pages), doi: 10.1093/nar/gks904, 2013.
3. O. Nikolova and S. Aluru, ``Parallel Bayesian network structure learning with application to gene networks,'' Proc. ACM/IEEE Supercomputing Conference (SC), 13 pages, 2012.
4. X. Yu, L. Li, J. Zola, M. Aluru, H. Ye, A. Foudree, H. Guo, S. Anderson, S. Aluru, P. Liu, S. Rodermel and Y. Yin, ``A brassinosteroid transcriptional network revealed by genome-wide identification of BES1 target genes in Arabidopsis thaliana,'' The Plant Journal, Vol. 65, No. 4, pp. 634-646, 2011.
5. O. Nikolova and S. Aluru, ``Parallel discovery of direct causal relations and Markov blankets with applications to gene networks,'' Proc. 40th International Conference on Parallel Processing (ICPP), pp. 512-521, 2011.
6. J. Zola, M. Aluru, A. Sarje and S. Aluru, "Parallel information theory based construction of gene regulatory networks," IEEE Transactions on Parallel and Distributed Systems, Vol. 21, No. 12, pp. 1721-1733, 2010.
7. T.M. Murali and S. Aluru, "Computational Systems Biology," In Algorithms and Theory of Computation Handbook. Volume II: Special Topics and Techniques, Edited by M.J. Atallah and M. Blanton, Chapman & Hall/CRC Computer and Information Science Series, Chapter 32 (26 pages), 2009.
8. O. Nikolova, J. Zola and S. Aluru, "A parallel algorithm for exact Bayesian structure inference," 16th International Conference on High Performance Computing (HiPC), pp. 342-349, 2009.
9. J. Zola, A. Sarje and S. Aluru, "Constructing gene regulatory networks on clusters of Cell processors," 38th International Conference on Parallel Processing (ICPP),pp. 108-115, 2009.
10. J. Zola, M. Aluru and S. Aluru, "Parallel information theory based construction of gene regulatory networks," Proc. 15th International Conference on High Performance Computing (HiPC), Springer-Verlag Lecture Notes in Computer Science, Vol. 5374, pp. 336-349, 2008.